Activating neurons in culture.

KCl gives you a very short lived activation, then the neurons lose their ionic gradient.

Notes:

  1. Solution switch at the time of arrow.
  2. Red line with question mark shows time where KCl enhanced activity is occurring but note the progressive depolarisation, neuron is losing its ionic gradient.
  3. The perfusion system was a standard peristaltic pump with a 2 mL/min flow – the effect of solution exchange is not immediate.
  4. Drugs added to standard ACSF
  5. Using gabazine* or TTX instead can modulate activity for longer term tests. * Assuming there are interneurons in your culture.

Images adapted from Marquez-Lopez 2022

See Markez-Lopez et al 2023 where we tested activity dependent tau secretion using gabazine and TTX as modulators of neuronal activity.

Supporting Early Career Researchers Beyond the Dissertation


By Dr. Mariana Vargas-Caballero

During a Master’s research project, students are often at a pivotal point. They’ve built expertise and developed advanced skills, their data is fresh, and their engagement with the project is at its peak. Yet, once the dissertation work concludes, that momentum is lost.

Bringing research outputs, like publication-quality figures, to completion often requires extra focused work. However, continuing research beyond the degree often depends on students being able to contribute their time without financial support, something not everyone can manage. Without a compensated opportunity, valuable work may be left incomplete, and talented students may miss out on important work experience.

Creating the Early Career Research Incubator

To address this issue, I’ve been developing a practical model within my lab since 2018. While I’m still refining the name, I currently refer to it as the Early Career Research Incubator. The idea is simple: if a student’s research has more to give, why should it stop at graduation?

Instead, students are offered a paid extension (typically six to twelve weeks) as formal work experience at the University of Southampton. This provides time and support to polish research outputs in a structured and compensated environment.

To date, I’ve supported six students through this model, including two who participated during their degree by contributing to lab work with their skills in areas outside their project. During their time in the Incubator, students have completed figures, contributed to publications or grant proposals, networked at conferences, and gained critical experience for job or PhD interviews in prestigious centres including the University of Southampton. This practice follows university employment policies and ensures that students are appropriately compensated for their time and expertise.

Why Post-Degree Support Matters

The Incubator treats graduates, and near graduates, as emerging professionals whose contributions deserve both credit and compensation. It recognises what students already know and can do.

It also directly addresses a long-standing issue in academic culture: the reliance on informal or unpaid work on top of the degree. By offering formal roles, we remove the expectation that students will “volunteer” to wrap up research or help with tasks not associated directly with their project, and instead create fair, ethical pathways for them to continue contributing and developing.

Case study

In summer 2023, Natasha Lebos, an International student at the University of Southampton, completed a six-week Summer Internship in the Vargas-Caballero lab, funded by the Alzheimer’s Research UK South Coast Network, following her Integrated Masters (MSc) in Neuroscience.

“I found the time invaluable. The extra weeks gave me the opportunity to gain confidence and feel independent. The studentship also helped me prepare for life as a PhD student, easing the transition from undergraduate to postgraduate. I am very grateful for the time spent working alongside the other PhD students in Mariana’s lab and learning techniques from her and other academics. I thoroughly enjoyed the experience and believe it has had a very positive impact on my career and abilities as a developing researcher.”

During her internship, Natasha applied her existing skills in cell culture, transfection, and imaging, and expanded these by conducting live assays, including antibody “feeding” experiments. Her work has provided essential insights and preliminary data for new lab projects aimed at understanding fundamental synapse biology and the mechanisms underlying schizophrenia.

Cultural Impact

Perhaps the most encouraging outcome of this practice has been seeing the model adopted by colleagues who have already introduced similar practices in their labs, adapting the approach to fit their teams and disciplines.

These small shifts in structure can lead to meaningful cultural change in our academic spaces making them more inclusive and supportive. The Incubator is not about finishing projects, it’s about building confidence, reinforcing skills, and offering a soft landing between student life and a research career.

Looking Ahead

This approach is scalable, it has an immediate impact on student’s CVs as added relevant work experience, and its relatively straightforward to implement. If we want to improve research culture, we don’t always need grand reforms. We can use existing structures such as paying real living wages or ideally higher wages in line with the work done, and utilise existing recruitment systems for short-term assignments that works together with work experience at the University of Southampton. Similar systems exist in other Universities.

Obviously, we need a budget to support such initiatives, and funding for this sort of position is limited. That is because most of the summer studentships are aimed at supporting students in the middle of their degree (e.g. end of their second year). These are excellent but we need to think differently for support beyond the dissertation. For this reason, I am now costing for a paid internship per year whenever I apply for a grant. For students, a paid role like this can be the first real bridge between study and the next step of their career. I am privileged for playing a role in that process.


Interview with Científicas Mexicanas (in Spanish)

Looking back and proud to share an interview (in Spanish) I did with the inspiring group of Mexicanas en las Ciencias (nearly 20 000 strong) .
🇲🇽
Studying biology as an undergraduate at the National University of the State of Mexico (UAEM) was an amazing way to get hands on with science. Lots of lab work (where I fell in love with cells), and plenty of field trips that allowed me to see nature and to get to know some beautiful places in Mexico.
🌳
Will always be grateful to my university and professors, and everyone who has supported de in my career.


Blog: Researching how Alzheimer’s starts.

Although most people experience some memory problems from time to time (specially as we age), Alzheimer’s disease causes a much steeper decline in memory that would be expected in healthy aging.

We have a large number of neurons in our brain! And together with glial cells they allow all of our minds and bodies to function.

In Alzheimer’s disease, brain cells die, and abnormal proteins (amyloid beta and tau) accumulate in the brain. What’s happening in between having a healthy brain and having a brain with Alzheimer’s disease? With support form Alzheimer’s Research UK the University of Southampton my lab has been researching how Alzheimer’s starts in the brain using mice as a disease model.

If neuronal networks were social networks each individual neuron would have 1000 contacts or more (very popular those neurons!).

In the talk for general public, presented here, I discuss how previous research in the human brain shows that neuron contacts (synapses) are lost early in Alzheimer’s disease, specially in the hippocampus (a brain area essential in making new declarative memories), and synapse loss is a strong indicator of cognitive impairment in humans and mouse models of the disease.

I use an analogy of social networks to describe the importance of neuronal communication; whether neurons are activated by information they receive via their contacts is extremely important to allow synaptic plasticity. The focus of our current work to understand the early stages of synapse loss.

Although it is clear that neuronal connections are lost early in Alzheimer’s disease, we still don’t know exactly when this loss happens or how it happens. Our work aims to understand how synapse loss is related to memory loss and whether we can rescue these.

We are analysing the emergence of synapse and memory loss using a mouse model of Alzheimer’s disease. Our work has found that synapse dysfunction, seen as a loss of synaptic plasticity, arises very early in the disease process in an Alzheimer’s disease mouse model. And this synaptic dysfunction is reversible early on. Our scientific work has been peer reviewed and published here. We are now researching what’s behind this synapse dysfunction (i.e. we are analysing the mechanisms to clarify what would be the best drug targets). And we continue to work to test how early or late we can intervene to rescue synapses and memory.

Blog: Presenting your Science

As scientists, we want to share our knowledge with others and for this we need to present our work. We normally want to share our rationale, results and claims (our argument ) with others. Their questions and feedback would normally be helpful :).

Presentations vary from those in small groups (such as lab meetings) to local seminars, conference talks (tens to hundreds or even thousands of attendees), and zoom talks which have become more commonplace after the COVID-19 pandemic.

Presenting can be both nerve-wracking and exciting. Developing the right skills can help to convert those nerves into excitement and lead to successful presentations.

Presentations can be nerve-wracking, but they are a necessary part of professional life (undergraduate projects, interviews, PhD-related presentations. In jobs outside science, presentations may be optional, but willing to present can gain you visibility). As an academic scientist I have seen the value of presentations since my undergraduate years. It is through presentations of my undergraduate projects that I discovered my love for experimental science and my capacity for critical thinking (I won a couple of presentation prizes back in the day!). This helped my confidence and my decision to pursue an academic career. But it is also through presentations that I have encountered tricky situations where either: someone with more experience or power gives what can be perceived as destructive feedback, or when I have doubted my own capacity as a presenter (this second one is easier to overcome – see the end of post for a practical solution to this one).

Getting better at presentations won’t happen instantly, but can certainly happen after practice + feedback.

The good news is that great speakers use a set of skills that anyone can develop. Like most skills, these need practice and feedback. The dream is to be able to give presentations that both you and your audience enjoy and benefit from.

Important questions to consider before starting your presentation:

  • What is the purpose of this presentation and what is being assessed or judged? Make sure to target the audience and plan towards meeting the aims of your presentation.
  • What is your message? What do you want your listeners to remember after your presentation? Don’t lose sight of your key message as you prepare, practice, and deliver.

Great speakers use a set of skills that anyone can develop.

To figure out your key point: Try summarising your message in 6 words (yes, you can summarise many stories – scientific or not – in 6 words!) then try summarising your presentation in two sentences.

Useful skills to develop as a presenter:

  • Learn about rhetoric and speech preparation. This course from Matt McGarrity, University of Washington is an excellent source of information and strategies to present complex ideas.

  1. Practice out load and in full to see how it works – also do a first check for timing.
  2. Direct your speech to someone – to project your voice (housemate? teddy bear?)
  3. Do a few rehearsals focusing in each rehearsal on a particular aspect, for example:
    • To check that you are pausing and not rushing (pauses are good! look up Martin Luther King or Barack Obama’s speeches to see some confident pausing).
    • To check if you do too much “umming and ahhing”. Checkout this video for excellent advice on how to stop “umming and ahhing” (see video at 36:40 for about 5 min) – you will need friend’s help to implement this super effective exercise!).
  4. Once you are happy with presentation, practice with someone “safe” (a nice colleague) and get feedback!
  5. Strive for excellence not perfection.
  6. You don’t have to practice the full presentation, specially if it’s long. Practice the start several times so that you can hit the ground running, practice the middle and the end.

If you’ve done all of the above then you are almost ready to present. But if you find that you tend to get nervous and maybe need to work on your voice and confidence, have a look at these TEDx talks (Caroline Goyder and Roger Love) about the importance of breathing, using your diaphragm (as actors do) and more!

  • On the day of the presentation. Make sure to warm up! There is lots of excellent advice online for actors or presenters. This video offers a great warm up routine. Just before your presentation: yawn, sing at the top of your voice (to warm up your vocal cords and face muscles) or strike a 2 minute power pose! to reduce your stress hormones (important: do this before you enter a crowded presentation room or before you switch on your camera and microphone on zoom!).

One last note: If you ever struggle in a presentation and that hinders your confidence (yes I have been there!). Or if memories of a “terrible” past presentation keep you awake at night (yes I have been there!), remember that one presentation does not define you. Ask for feedback from someone who saw your presentation (it’s normally not as terrible as you thought). Ask someone nice, but who is willing to give honest feedback and work on their advice to improve for next time!

Enjoy presenting!

Dr. Mariana Vargas-Caballero.